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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4016538_4017194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4016538 - 4017194

Intron Length:

657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

ATTTTTCTACCT

Flanking Amino Acid:

AASSDLTVIKETEELPLEPE

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

81.2

33.8

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

84.2

0.77

0.7

77.1

31.6

Minor 5ss

41.3

-1

58.7

45.8

Minor BPS

54.1

0.21

1.9

78.25

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024413

4016102 - 4020887

4786

ENSAPLT00000006607

4004863 - 4020887

16025