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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4019890_4020698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4019890 - 4020698

Intron Length:

809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTCCTTAATA

Flanking Amino Acid:

KSVLTERLRKAIEEEGGNPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

80.6

0.69

0.8

29.3

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

93.3

1.36

0.6

95.44

19.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024413

4016102 - 4020887

4786

ENSAPLT00000006607

4004863 - 4020887

16025