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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4025120_4025775_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4025120 - 4025775

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTTCCTGAACA

Flanking Amino Acid:

SSSSDLIEMKKTEKLHLEPE

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

70.6

0.46

66.5

38.9

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

81.1

0.97

1.3

87.28

29.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006039

4021420 - 4038370

16951