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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4027201_4027622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4027201 - 4027622

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTTTT

5'SS Class:

major

3'SS Sequence:

GTTTTGTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TTCTCTCTGACT

Flanking Amino Acid:

STSEGGDQKKSPVEEDRDTK

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

81.7

32.3

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

0.67

0.8

77.9

36.6

Minor 5ss

48.6

-0.1

2.4

67.6

43.4

Minor BPS

65.8

0.58

1.7

83.75

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006039

4021420 - 4038370

16951