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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4030042_4031058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4030042 - 4031058

Intron Length:

1017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTGGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATATCTTTATTT

Flanking Amino Acid:

LKNLFSKYGKVVGAKVVTNA

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.9

31.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

62.5

0.28

1.2

42.9

Minor 5ss

33.8

-1.8

3.7

49.2

47.3

Minor BPS

0.58

1.5

78.98

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006039

4021420 - 4038370

16951