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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4032494_4032826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4032494 - 4032826

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGGTTTATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TTCTGCTCAACC

Flanking Amino Acid:

SSDQPKTNKSGSKGTERTVV

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

81.2

33.8

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

70.2

0.46

65.3

40.4

Minor 5ss

41.3

-1

58.7

45.8

Minor BPS

60.7

0.31

74.59

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006039

4021420 - 4038370

16951