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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4057017_4057099_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4057017 - 4057099

Intron Length:
83

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCAGCT

5'SS Class:
major

3'SS Sequence:
CCTTGGAATACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATAAGAT

U12 Branch Point Sequence:
TCTCCTTGGAAT

Flanking Amino Acid:
PAFTGVQQYAAVYPTTSITP

Intron Amino Acid Position:
378

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.3
0.43
1.2
63.6
41.2

Major BPS
58.6
0.22
1.1
55.1
40.4

Major PPT
65.7
0.35
1
57.8
41.3

Minor 5ss
37.5
-1.4
3.6
57.4
46.7

Minor BPS
51.1
0.12
1.6
70.4
40.5

Associated Gene:

Gene:
CELF5

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4055440 - 4090271
34832