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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4101054_4101449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4101054 - 4101449

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCGTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

GGCTACTTATTT

Flanking Amino Acid:

YLGVAYVAVQHFGLLYKMIQ

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

81.4

0.71

0.8

72.4

37.7

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

0.11

1.8

66.47

44.1

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005049

4100954 - 4108101

7148

ENSAPLT00000038871

4097699 - 4108101

10403