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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4101669_4102277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4101669 - 4102277

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGAAAT

U12 Branch Point Sequence:

GTGTCCTGAAGA

Flanking Amino Acid:

VKQHHVKADKRDPEFVFYDQ

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.5

Major BPS

59.4

0.23

1.2

65.3

38.6

Major PPT

77.1

0.61

0.8

71.8

32.8

Minor 5ss

33.3

-1.9

2.9

41.4

44.7

Minor BPS

59.6

0.3

1.8

69.13

42.9

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038871

4097699 - 4108101

10403

ENSAPLT00000005049

4100954 - 4108101

7148