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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4102442_4102680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4102442 - 4102680

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

ATGTGATGAACT

Flanking Amino Acid:

TRVIYNLTDKQIQQEQLESV

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

89.6

0.89

0.7

85.3

29.1

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

49.1

0.01

2.1

72.69

43.7

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005049

4100954 - 4108101

7148