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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4102769_4102979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4102769 - 4102979

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGAGGC

5'SS Class:

major

3'SS Sequence:

CCTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

AAGTGCATAATC

Flanking Amino Acid:

DSLRNSIMDRRARVDTKALT

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

65.4

39.1

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

85.3

0.79

0.6

84.7

23.2

Minor 5ss

27.1

-2.6

3.1

33.9

41.5

Minor BPS

48.3

-0.1

58.86

40.2

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005049

4100954 - 4108101

7148

ENSAPLT00000038871

4097699 - 4108101

10403