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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4103727_4103894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4103727 - 4103894

Intron Length:

168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGGAT

U12 Branch Point Sequence:

AGTTCTTGGATT

Flanking Amino Acid:

RWLEDNLDHTDSSLLQDNVA

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.8

78.1

26.4

Major BPS

59.1

0.23

1.4

60.7

45.9

Major PPT

0.88

0.8

84.5

30.4

Minor 5ss

34.2

-1.8

2.8

36.8

41.9

Minor BPS

60.2

0.4

1.4

74.56

36.2

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038871

4097699 - 4108101

10403

ENSAPLT00000005049

4100954 - 4108101

7148