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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4104517_4104685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4104517 - 4104685

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

CTTTGTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTAAAG

U12 Branch Point Sequence:

GGGTTGCTACTT

Flanking Amino Acid:

AHYDSFGVAPWLSHGADSNG

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

46.3

-0.2

1.6

44.6

Major PPT

83.3

0.75

0.8

77.4

31.4

Minor 5ss

38.4

-1.3

41.2

Minor BPS

38.4

-0.8

2.3

53.18

42.4

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038871

4097699 - 4108101

10403

ENSAPLT00000005049

4100954 - 4108101

7148