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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4104767_4104956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4104767 - 4104956

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CATTCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

TGACGCTGATCC

Flanking Amino Acid:

INDWLIPSVEGRLTGLGGED

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

75.5

0.57

0.8

69.5

30.7

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

-0.4

54.84

42.4

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038871

4097699 - 4108101

10403

ENSAPLT00000005049

4100954 - 4108101

7148