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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4105052_4105646_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4105052 - 4105646

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACAAAA

U12 Branch Point Sequence:

ACTTCCCCAGCT

Flanking Amino Acid:

ASQGSASAAEVLLHTATANG

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

-0.1

1.1

51.2

Major PPT

87.2

0.84

0.8

81.2

36.5

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

48.4

-0

2.1

71.77

44.7

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038871

4097699 - 4108101

10403

ENSAPLT00000005049

4100954 - 4108101

7148