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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4105792_4106025_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4105792 - 4106025

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATCAA

5'SS Class:

major

3'SS Sequence:

CTTAAATCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TCTCGCTTAAAT

Flanking Amino Acid:

ISSVPQDVVRQFMEIEPEML

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

67.5

39.6

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

70.6

0.46

0.9

66.4

39.3

Minor 5ss

32.4

-2

2.9

32.3

42.4

Minor BPS

60.9

0.42

1.9

78.73

43.1

Associated Gene:

Gene:

NCLN

Ensembl Gene ID:

ENSAPLG00000004844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038871

4097699 - 4108101

10403

ENSAPLT00000005049

4100954 - 4108101

7148