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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4117690_4117880_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4117690 - 4117880

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCGTGGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACCCAG

U12 Branch Point Sequence:

TTTTCCTCCTCT

Flanking Amino Acid:

DWVMTAAHCMGNATVILGAH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

39.3

-0.6

1.6

44.1

40.8

Major PPT

58.2

0.18

1.1

43.3

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

44.5

-0.3

3.7

84.24

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004777

4117394 - 4120006

2613