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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4118017_4118304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4118017 - 4118304

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTCTCCAAAAGC

Flanking Amino Acid:

TVSNDIMLLKLTAKATLNSY

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.02

0.9

67.9

43.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

77.2

0.61

0.8

37.1

Minor 5ss

19.8

-3.5

3.8

28.6

43.8

Minor BPS

48.6

-0.1

2.2

67.02

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004777

4117394 - 4120006

2613