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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4136906_4138503_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4136906 - 4138503

Intron Length:

1598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

ACTCTGTTAACT

Flanking Amino Acid:

HLVDYFPEFDGPQRDAQAAR

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

82.1

0.72

0.9

77.3

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

56.7

0.29

2.1

75.16

41.7

Associated Gene:

Gene:

GNA11

Ensembl Gene ID:

ENSAPLG00000004066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004190

4136715 - 4143706

6992