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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4141777_4143398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4141777 - 4143398

Intron Length:

1622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCAATCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGCTTTTCAATC

Flanking Amino Acid:

KILYKYEQNKANAVLIREVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

81.6

0.71

0.8

78.3

34.8

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

55.5

0.15

1.5

62.32

37.9

Associated Gene:

Gene:

GNA11

Ensembl Gene ID:

ENSAPLG00000004066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004190

4136715 - 4143706

6992