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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4160249_4161419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4160249 - 4161419

Intron Length:

1171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TCTGGCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GTTTTCTGACTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.9

40.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

80.5

0.69

0.9

76.7

37.4

Minor 5ss

31.9

-2.1

3.3

41.4

45.1

Minor BPS

50.8

-0.1

1.8

60.39

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031255

4159963 - 4167151

7189