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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4161484_4163977_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4161484 - 4163977

Intron Length:

2494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCTCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TTGTTCTTTTCT

Flanking Amino Acid:

MQRHYVMYYEMSYGLNI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.2

35.6

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

75.3

0.57

0.8

68.4

31.9

Minor 5ss

30.6

-2.2

3.5

39.1

40.7

Minor BPS

45.1

-0.3

3.6

79.16

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031255

4159963 - 4167151

7189