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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4164023_4165402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4164023 - 4165402

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCACCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TTTTTCCCACCC

Flanking Amino Acid:

YGLNIEMHKQAEIVKRLNGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

37.4

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

72.1

0.5

0.8

61.9

34.5

Minor 5ss

27.1

-2.6

3.7

36.6

47.9

Minor BPS

48.8

-0.1

2.1

70.95

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031255

4159963 - 4167151

7189