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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4176368_4179227_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4176368 - 4179227

Intron Length:

2860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTGATTTCC

5'SS Class:

major

3'SS Sequence:

GGGGCTCTGTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGCCAA

U12 Branch Point Sequence:

GGGGGCCCAGCC

Flanking Amino Acid:

TEIQRHYVMVMGTGLGVQLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

60.2

32.8

Major BPS

43.2

-0.4

1.2

45.8

37.5

Major PPT

57.7

0.17

1.1

54.3

45.8

Minor 5ss

37.9

-1.4

2.8

46.7

36.6

Minor BPS

-1.3

2.1

36.88

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030005

4176132 - 4184027

7896