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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4176610_4176719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4176610 - 4176719

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCGAC

U12 Branch Point Sequence:

CAGTGCCGACTC

Flanking Amino Acid:

AQLIPFLSQEHQQQVVQAVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

47.5

-0.1

1.3

43.8

40.8

Major PPT

0.49

0.9

65.2

36.2

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

35.9

-1

2.1

40.52

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035893

4175449 - 4180933

5485