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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4176783_4178846_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4176783 - 4178846

Intron Length:

2064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CAACTCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CCCCCCACAACT

Flanking Amino Acid:

YGLNIEMHKQTEIAKRLNVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

73.1

0.52

0.9

65.8

35.3

Minor 5ss

46.1

-0.4

3.2

63.6

48.1

Minor BPS

47.5

-0.1

1.9

62.51

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035893

4175449 - 4180933

5485