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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4178892_4179231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4178892 - 4179231

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTGAT

5'SS Class:

major

3'SS Sequence:

TCTCTCCTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

CATCCCCGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

75.3

34.3

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

76.4

0.59

0.9

31.8

Minor 5ss

30.9

-2.2

3.1

38.9

40.5

Minor BPS

44.1

-0.4

55.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035893

4175449 - 4180933

5485