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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4180042_4184018_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4180042 - 4184018

Intron Length:

3977

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCCCCGGCC

5'SS Class:

major

3'SS Sequence:

TGCCACCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

CTGTCACTACCG

Flanking Amino Acid:

PRQSLKLTYPETL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.3

62.7

37.3

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

65.6

0.35

0.9

57.4

33.1

Minor 5ss

-3.5

4.1

33.8

41.8

Minor BPS

44.1

-0.5

2.2

52.96

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030005

4176132 - 4184027

7896