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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4180114_4180731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4180114 - 4180731

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CTCCTGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

GCAGCTGTGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

0.22

1.2

52.4

43.3

Major PPT

67.9

0.4

40.4

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

44.4

-0.4

2.1

50.26

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035893

4175449 - 4180933

5485