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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4188415_4188547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4188415 - 4188547

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CGTCGGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TTGGCCTGACCC

Flanking Amino Acid:

RGEGRDVTESRLSFYSGHSS

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

51.1

0.03

1.2

39.9

Major PPT

61.5

0.26

50.1

39.3

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

52.9

0.07

1.9

66.89

44.7

Associated Gene:

Gene:

PLPP2

Ensembl Gene ID:

ENSAPLG00000002405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002432

4186787 - 4190787

4001