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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4222165_4222245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4222165 - 4222245

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCGAT

U12 Branch Point Sequence:

GCCCCCCCGATG

Flanking Amino Acid:

QPPSSSPASQGGLAPRREQS

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

47.5

-0.1

1.3

43.7

39.4

Major PPT

80.7

0.69

0.7

31.8

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

40.3

-0.9

1.8

37.71

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031238

4219546 - 4223971

4426

ENSAPLT00000030659

4219546 - 4223971

4426

ENSAPLT00000021613

4219546 - 4223971

4426