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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4231793_4232269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4231793 - 4232269

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ACGTCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TGGTCTCTAACT

Flanking Amino Acid:

APIPLMKISPWWYFAVISMS

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

72.3

0.55

73.3

28.9

Major PPT

77.2

0.61

0.9

73.6

36.3

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

66.4

0.59

1.7

81.44

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016967

4229221 - 4236391

7171