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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4243636_4244120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4243636 - 4244120

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CCCTTGCTAACG

Flanking Amino Acid:

LLLSALWGCSGRPLAEMVVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

83.4

0.75

0.7

76.4

32.2

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

42.7

-0.6

2.3

46.51

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034794

4243587 - 4246632

3046