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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4244821_4245124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4244821 - 4245124

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAG

U12 Branch Point Sequence:

CTGCCCGGGACC

Flanking Amino Acid:

REASVAVSTGAVAEQPAAAV

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

58.2

0.2

1.5

67.3

37.8

Major PPT

77.8

0.63

0.9

72.2

37.8

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

44.6

-0.4

2.2

55.74

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034794

4243587 - 4246632

3046

ENSAPLT00000023916

4243823 - 4246632

2810