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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4247484_4247653_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4247484 - 4247653

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGGGCG

5'SS Class:

major

3'SS Sequence:

CGTGTCGCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTAAG

U12 Branch Point Sequence:

ACCGCGGTAAGG

Flanking Amino Acid:

WYVRLAHHSHRTAFNNNIST

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

57.6

41.5

Major BPS

43.3

-0.4

1.6

44.7

45.2

Major PPT

59.7

0.22

1.1

54.1

41.5

Minor 5ss

-3.1

3.4

29.5

43.4

Minor BPS

34.5

-1.3

2.6

36.17

Associated Gene:

Gene:

TPGS1

Ensembl Gene ID:

ENSAPLG00000030022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041853

4245912 - 4248326

2415