Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_4257913_4258367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4257913 - 4258367

Intron Length:

455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GGTGTCTGACTT

Flanking Amino Acid:

PEIKGEINISVVPQVVAYKK

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

38.6

Major BPS

63.7

0.34

1.2

41.8

Major PPT

81.8

0.71

0.8

76.6

Minor 5ss

43.3

-0.7

2.9

58.9

45.5

Minor BPS

46.4

-0.2

1.8

61.63

42.6

Associated Gene:

Gene:

BSG

Ensembl Gene ID:

ENSAPLG00000011010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023609

4253830 - 4263119

9290

ENSAPLT00000011479

4253830 - 4263119

9290