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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4258984_4261240_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4258984 - 4261240

Intron Length:

2257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTGAACATGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

CTGTCCTGAACA

Flanking Amino Acid:

KRRKPDEVLDDDDGGSAPLK

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

69.6

0.49

59.5

Major PPT

51.8

0.04

1.1

49.8

37.4

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

71.8

0.68

1.5

76.23

Associated Gene:

Gene:

BSG

Ensembl Gene ID:

ENSAPLG00000011010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011479

4253830 - 4263119

9290