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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4258984_4261588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4258984 - 4261588

Intron Length:

2605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TTTGTATTCACT

Flanking Amino Acid:

KRRKPDEVLDGKAMPQTTRT

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

82.3

0.8

83.6

25.8

Major PPT

83.9

0.76

0.7

32.6

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

53.2

0.18

2.1

80.31

41.8

Associated Gene:

Gene:

BSG

Ensembl Gene ID:

ENSAPLG00000011010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023609

4253830 - 4263119

9290