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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4267653_4267930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4267653 - 4267930

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

CCTGTCCGCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCCGGCTGACGC

Flanking Amino Acid:

DSSRRQYQEKYKQVEQYMSF

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

66.9

0.38

0.9

35.1

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

33.6

-1.2

2.1

33.45

42.2

Associated Gene:

Gene:

HCN2

Ensembl Gene ID:

ENSAPLG00000018891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025624

4266397 - 4271049

4653