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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4268934_4269219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4268934 - 4269219

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGGCTC

5'SS Class:

major

3'SS Sequence:

CCTCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TCTCCCTGCCCC

Flanking Amino Acid:

TVAIDRLDRIGKKNSILLHK

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

61.2

40.4

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

79.1

0.65

0.7

72.8

25.4

Minor 5ss

34.1

-1.8

3.7

46.7

43.4

Minor BPS

38.1

-0.9

3.5

60.44

44.6

Associated Gene:

Gene:

HCN2

Ensembl Gene ID:

ENSAPLG00000018891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025624

4266397 - 4271049

4653