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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4272274_4273058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4272274 - 4273058

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTCCTCTCACCT

Flanking Amino Acid:

MEQLSSVPETGEFNLTKVMD

Intron Amino Acid Position:

1241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

72.7

0.56

30.1

Major PPT

78.3

0.64

0.8

73.5

31.5

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

47.7

-0

1.9

64.73

45.8

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894