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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4273719_4274197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4273719 - 4274197

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

CGCCTCTTAACC

Flanking Amino Acid:

HALTVDVMNQICRQQFVALH

Intron Amino Acid Position:

1190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

77.1

0.67

77.9

32.2

Major PPT

61.4

0.26

57.5

37.3

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

63.8

0.41

1.4

63.92

41.7

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894