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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4274271_4274474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4274271 - 4274474

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCGCC

5'SS Class:

major

3'SS Sequence:

TGCTGCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

ACTGCCTCACAG

Flanking Amino Acid:

HMMLTALHCFRQGLTFVSVH

Intron Amino Acid Position:

1165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

68.2

38.6

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

71.3

0.48

0.9

61.6

Minor 5ss

36.2

-1.6

3.5

50.4

46.4

Minor BPS

43.4

-0.6

46.98

45.8

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894