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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4274574_4274820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4274574 - 4274820

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTCTGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

CGTGCCCCAGCT

Flanking Amino Acid:

LSVKSSANTNQKPDTVKQKN

Intron Amino Acid Position:

1132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

70.3

40.5

Major BPS

59.9

0.25

1.3

70.1

Major PPT

0.56

0.9

68.6

37.3

Minor 5ss

38.5

-1.3

3.3

54.8

43.4

Minor BPS

43.2

-0.4

2.1

61.84

47.4

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894