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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4275708_4275999_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4275708 - 4275999

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CTAACTCCAGCC

Flanking Amino Acid:

EMFSATRDIQHWLTESAKLI

Intron Amino Acid Position:

1077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

69.9

41.1

Major BPS

64.5

0.36

65.2

28.2

Major PPT

55.4

0.12

0.9

51.8

24.9

Minor 5ss

32.3

-2

3.1

42.6

44.3

Minor BPS

40.5

-0.7

1.9

49.1

40.7

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894