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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4276087_4276340_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4276087 - 4276340

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCCTGC

5'SS Class:

weak_major

3'SS Sequence:

CCGGTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TGCCCCTCATTC

Flanking Amino Acid:

RLKEIDEFPEEYLWEASHYL

Intron Amino Acid Position:

1048

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

45.3

Major BPS

0.5

1.1

71.2

35.2

Major PPT

0.38

60.7

40.2

Minor 5ss

48.3

-0.1

2.9

67.9

43.4

Minor BPS

47.8

-0.1

1.8

56.91

41.8

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894