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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4277532_4279350_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4277532 - 4279350

Intron Length:

1819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCTTCCCACACA

Flanking Amino Acid:

AFVSHFPVHQDGSCNGLQHY

Intron Amino Acid Position:

947

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

74.7

0.56

0.8

69.3

30.3

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

47.6

-0.2

2.4

67.55

44.9

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894