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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4280799_4280975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4280799 - 4280975

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGTCCCTCACCT

Flanking Amino Acid:

HIYSFRSSWQVGLIKPHPIF

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.2

39.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

80.8

0.69

0.7

73.4

31.6

Minor 5ss

-1.5

3.2

50.1

46.5

Minor BPS

58.3

0.34

1.9

78.98

42.6

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894