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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4281216_4281863_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4281216 - 4281863

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

GCTGACTTGATT

Flanking Amino Acid:

YIHLLAKDSQPGEYLPREYW

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

0.62

65.3

41.5

Major PPT

72.1

0.5

0.9

65.4

36.1

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

54.1

0.21

1.7

68.42

42.9

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894