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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4282829_4283273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4282829 - 4283273

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCCGC

5'SS Class:

major

3'SS Sequence:

GCTCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTTAC

U12 Branch Point Sequence:

TGGCGCTTACTG

Flanking Amino Acid:

SALLDNFYSKEKVVSYPKLD

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

60.8

44.4

Major BPS

0.1

1.2

46.7

38.6

Major PPT

75.5

0.57

0.9

68.7

37.2

Minor 5ss

39.9

-1.1

3.1

51.3

39.6

Minor BPS

45.1

-0.5

2.1

49.09

44.9

Associated Gene:

Gene:

POLRMT

Ensembl Gene ID:

ENSAPLG00000003051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003126

4272224 - 4286117

13894